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Name Version License URL
click 8.2.1 3-Clause BSD License https://github.com/pallets/click/
protobuf 6.31.1 3-Clause BSD License https://developers.google.com/protocol-buffers/
msgpack 1.1.1 Apache 2.0 https://msgpack.org/
pydeck 0.9.1 Apache License 2.0 https://github.com/visgl/deck.gl/tree/master/bindings/pydeck
boto3 1.39.9 Apache Software License https://github.com/boto/boto3
botocore 1.39.9 Apache Software License https://github.com/boto/botocore
nextflow 25.4.6 Apache Software License UNKNOWN
pyarrow 21.0.0 Apache Software License https://arrow.apache.org/
requests 2.32.4 Apache Software License https://requests.readthedocs.io
s3transfer 0.13.1 Apache Software License https://github.com/boto/s3transfer
streamlit 1.47.0 Apache Software License https://streamlit.io
tenacity 9.1.2 Apache Software License https://github.com/jd/tenacity
tornado 6.5.1 Apache Software License http://www.tornadoweb.org/
tzdata 2025.2 Apache Software License https://github.com/python/tzdata
watchdog 6.0.0 Apache Software License https://github.com/gorakhargosh/watchdog
packaging 25.0 Apache Software License; BSD License https://github.com/pypa/packaging
python-dateutil 2.9.0.post0 Apache Software License; BSD License https://github.com/dateutil/dateutil
cryptography 45.0.5 Apache-2.0 OR BSD-3-Clause https://github.com/pyca/cryptography
Authlib 1.6.1 BSD License https://github.com/authlib/authlib
GitPython 3.1.44 BSD License https://github.com/gitpython-developers/GitPython
Jinja2 3.1.6 BSD License https://github.com/pallets/jinja/
MarkupSafe 3.0.2 BSD License https://github.com/pallets/markupsafe/
Pygments 2.19.2 BSD License https://pygments.org
altair 5.5.0 BSD License https://github.com/vega/altair
biopandas 0.5.1 BSD License https://github.com/rasbt/biopandas
cmap 0.6.2 BSD License https://github.com/pyapp-kit/cmap
gitdb 4.0.12 BSD License https://github.com/gitpython-developers/gitdb
idna 3.10 BSD License https://github.com/kjd/idna
numpy 2.3.1 BSD License https://numpy.org
pandas 2.3.1 BSD License https://pandas.pydata.org
psutil 7.0.0 BSD License https://github.com/giampaolo/psutil
pycparser 2.22 BSD License https://github.com/eliben/pycparser
python-dotenv 1.1.1 BSD License https://github.com/theskumar/python-dotenv
scipy 1.16.0 BSD License https://scipy.org/
smmap 5.0.2 BSD License https://github.com/gitpython-developers/smmap
biopython 1.85 Freely Distributable https://biopython.org/
shellingham 1.5.4 ISC License (ISCL) https://github.com/sarugaku/shellingham
SQLAlchemy 2.0.41 MIT https://www.sqlalchemy.org
rpds-py 0.26.0 MIT https://github.com/crate-py/rpds
timeago 1.0.16 MIT https://github.com/hustcc/timeago
PyYAML 6.0.2 MIT License https://pyyaml.org/
annotated-types 0.7.0 MIT License https://github.com/annotated-types/annotated-types
appdirs 1.4.4 MIT License http://github.com/ActiveState/appdirs
attrs 25.3.0 MIT License https://www.attrs.org/en/stable/changelog.html
blinker 1.9.0 MIT License https://github.com/pallets-eco/blinker/
cachetools 6.1.0 MIT License https://github.com/tkem/cachetools/
cffi 1.17.1 MIT License http://cffi.readthedocs.org
charset-normalizer 3.4.2 MIT License https://github.com/jawah/charset_normalizer/blob/master/CHANGELOG.md
humanize 4.12.3 MIT License https://github.com/python-humanize/humanize
jmespath 1.0.1 MIT License https://github.com/jmespath/jmespath.py
markdown-it-py 3.0.0 MIT License https://github.com/executablebooks/markdown-it-py
mdurl 0.1.2 MIT License https://github.com/executablebooks/mdurl
mmtf-python 1.1.3 MIT License https://github.com/rcsb/mmtf-python.git
mypy-boto3 1.39.0 MIT License https://github.com/youtype/mypy_boto3_builder
mypy-boto3-omics 1.39.0 MIT License https://github.com/youtype/mypy_boto3_builder
mypy-boto3-s3 1.39.5 MIT License https://github.com/youtype/mypy_boto3_builder
mypy-boto3-stepfunctions 1.39.8 MIT License https://github.com/youtype/mypy_boto3_builder
narwhals 1.48.0 MIT License https://github.com/narwhals-dev/narwhals
plotly 6.2.0 MIT License https://plotly.com/python/
pydantic 2.11.7 MIT License https://github.com/pydantic/pydantic
pydantic-settings 2.10.1 MIT License https://github.com/pydantic/pydantic-settings
pydantic_core 2.33.2 MIT License https://github.com/pydantic/pydantic-core
pytz 2025.2 MIT License http://pythonhosted.org/pytz
rich 14.0.0 MIT License https://github.com/Textualize/rich
six 1.17.0 MIT License https://github.com/benjaminp/six
toml 0.10.2 MIT License https://github.com/uiri/toml
typer 0.16.0 MIT License https://github.com/fastapi/typer
pillow 11.3.0 MIT-CMU License https://python-pillow.github.io
jsonschema 4.25.0 MIT license https://github.com/python-jsonschema/jsonschema
jsonschema-specifications 2025.4.1 MIT license https://github.com/python-jsonschema/jsonschema-specifications
referencing 0.36.2 MIT license https://github.com/python-jsonschema/referencing
streamlit-js-eval 0.1.7 MIT license https://github.com/aghasemi/streamlit_js_eval
streamlit-timeago 0.1.2 MIT license https://github.com/prihoda/streamlit-timeago
typing-inspection 0.4.1 MIT license https://github.com/pydantic/typing-inspection
urllib3 2.5.0 MIT license https://github.com/urllib3/urllib3/blob/main/
certifi 2025.7.14 Mozilla Public License 2.0 (MPL 2.0) https://github.com/certifi/python-certifi
typing_extensions 4.14.1 PSF License Version 2 https://github.com/python/typing_extensions
looseversion 1.1.2 Python Software Foundation License https://github.com/effigies/looseversion