scripts

scripts

The scripts directory stores all Python code used by the R Shiny application for FACS file merging.

SPECIAL ATTRIBUTION: operations.py was developed by Marek Cmero, which was derived from his celseq-sample-sheet-generator repository.

This markdown file contains the following contents:

1. Directory Structure
2. Python Dependencies

Directory Structure

• operations.py: A list of FACS file merging operations developed by WEHI Senior Research Officer, Marek Cmero
• fcs_converter.py: Uses functions within operations.py to streamline all file merging processes into 1 operation; called by server.handler.R

Python Dependencies

The following 3rd party libraries were used:

• Pandas
• OpenPyXL
• FCSParser