sleepecg/pyproject.toml at main · cbrnr/sleepecg · GitHub

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[build-system]
requires = ["setuptools>=77.0.3", "setuptools-scm", "numpy>=2"]
build-backend = "setuptools.build_meta"

[project]
name = "sleepecg"
version = "0.6.0.dev0"
description = "A package for sleep stage classification using ECG data"
license = "BSD-3-Clause"
license-files = ["LICENSE"]
authors = [
    {name = "Florian Hofer", email = "hofaflo@gmail.com"},
    {name = "Clemens Brunner", email = "clemens.brunner@gmail.com"},
]
readme = "README.md"
requires-python = ">= 3.10"
classifiers = [
    "Operating System :: Microsoft :: Windows",
    "Operating System :: POSIX :: Linux",
    "Operating System :: MacOS :: MacOS X",
    "Programming Language :: Python :: 3",
    "Programming Language :: Python :: 3.10",
    "Programming Language :: Python :: 3.11",
    "Programming Language :: Python :: 3.12",
    "Programming Language :: Python :: 3.13",
    "Programming Language :: Python :: Implementation :: CPython",
    "Typing :: Typed",
]
keywords = ["sleep", "ecg", "qrs", "peak"]
dependencies = [
    "numpy >= 1.26.0",
    "pyyaml >= 6.0.0",
    "requests >= 2.32.3",
    "scipy >= 1.13.0",
    "tqdm >= 4.66.0",
]

[project.optional-dependencies]
cibw = [  # cibuildwheel uses this for running the test suite
    "edfio >= 0.4.4",
    "numba >= 0.61.0",
    "wfdb >= 4.2.0",
]
docs = [  # RTD uses this when building the documentation
    "mkdocs-material >= 9.5.0",
    "mkdocstrings-python >= 1.11.1",
]
full = [  # complete package functionality
    "edfio >= 0.4.4",
    "joblib >= 1.4.2",
    "matplotlib >= 3.9.2",
    "numba >= 0.61.0",
    "tensorflow >= 2.17.0; python_version < '3.13'",
    "wfdb >= 4.2.0",
]

[dependency-groups]
dev = [
    "sleepecg[docs]",
    "sleepecg[full]",
    "mypy >= 0.991",
    "pre-commit >= 2.13.0",
    "pytest >= 6.2.0",
    "pytest-cov >= 6.0.0",
    "ruff >= 0.8.0",
    "setuptools >= 72.1.0",
    "types-requests",
    "types-pyyaml",
]

[project.urls]
homepage = "https://github.com/cbrnr/sleepecg"
documentation = "https://sleepecg.readthedocs.io/en/latest/"
repository = "https://github.com/cbrnr/sleepecg"
changelog = "https://github.com/cbrnr/sleepecg/blob/main/CHANGELOG.md"

[tool.cibuildwheel]
test-requires = "pytest"
test-extras = "cibw"
test-command = "pytest {package}"
skip = "*musllinux*"
build = "cp310-*"  # abi3
archs = "native"

[tool.cibuildwheel.linux]
manylinux-x86_64-image = "manylinux_2_28"
manylinux-aarch64-image = "manylinux_2_28"

[tool.cibuildwheel.windows]
before-build = "pip install delvewheel"
repair-wheel-command = [
    "delvewheel repair -w {dest_dir} {wheel}",
]

[[tool.cibuildwheel.overrides]]
select = "*"
inherit.repair-wheel-command = "append"
repair-wheel-command = [
  "pipx run abi3audit --strict --report {wheel}",
]

[tool.mypy]
ignore_missing_imports = true
disallow_untyped_defs = true
warn_unreachable = true
strict_equality = true
pretty = true

[tool.pytest.ini_options]
markers = ["c_extension"]
filterwarnings = ["error"]

[tool.ruff]
line-length = 92
exclude = ["setup.py"]

[tool.ruff.lint]
select = ["C4", "D", "E", "F", "FURB", "I", "PERF", "W", "UP"]
ignore = ["D105"]

[tool.ruff.lint.per-file-ignores]
"__init__.py" = ["F401"]
"**/examples/*.py" = ["D100"]

[tool.ruff.lint.pydocstyle]
convention = "numpy"