Right now, our spatial requirements are centered around Visium (a descendant of "EFO:0010961" for Visium Spatial Gene Expression) or Slide-seq V2 ("EFO:0030062" for Slide-seqV2).
Stemming from a recent submission request, new EFO terms were created for curio seeker assays - under bead-based spatial transcriptomics/EFO:0920001
As these should have the same requirements as Slide-seq V2 data, support can be extended by changing "EFO:0030062" for Slide-seqV2 to a descendant of "EFO:0920001" for bead-based spatial transcriptomics in a handful of spots in the schema
Right now, our spatial requirements are centered around Visium (
a descendant of "EFO:0010961" for Visium Spatial Gene Expression) or Slide-seq V2 ("EFO:0030062" for Slide-seqV2).Stemming from a recent submission request, new EFO terms were created for curio seeker assays - under bead-based spatial transcriptomics/EFO:0920001
As these should have the same requirements as Slide-seq V2 data, support can be extended by changing
"EFO:0030062" for Slide-seqV2toa descendant of "EFO:0920001" for bead-based spatial transcriptomicsin a handful of spots in the schema