pyCoreGage/pyproject.toml at main · ganeshbabuNN/pyCoreGage · GitHub

1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
[build-system]
requires = ["setuptools>=68", "wheel"]
build-backend = "setuptools.build_meta"

[project]
name = "pyCoreGage"
version = "1.0.0"
description = "Data Quality Check Framework for Clinical and Analytical Data"
readme = "README.md"
license = { text = "GPL-3.0-or-later" }
authors = [
    { name = "Ganesh Babu G", email = "ganeshbabu346@gmail.com" }
]
keywords = [
    "clinical-data", "data-quality", "CDISC", "SDTM", "ADaM",
    "data-management", "validation", "pharma",
]
classifiers = [
    "Development Status :: 3 - Alpha",
    "Intended Audience :: Science/Research",
    "Intended Audience :: Healthcare Industry",
    "License :: OSI Approved :: GNU General Public License v3 or later (GPLv3+)",
    "Programming Language :: Python :: 3",
    "Programming Language :: Python :: 3.9",
    "Programming Language :: Python :: 3.10",
    "Programming Language :: Python :: 3.11",
    "Programming Language :: Python :: 3.12",
    "Topic :: Scientific/Engineering :: Medical Science Apps.",
    "Topic :: Office/Business :: Financial :: Spreadsheet",
]
requires-python = ">=3.9"
dependencies = [
    "pandas>=1.5.0",
    "openpyxl>=3.1.0",
]

[project.optional-dependencies]
sas = ["pyreadstat>=1.2.0"]
dev = [
    "pytest>=7.4",
    "pytest-cov>=4.1",
    "pyreadstat>=1.2.0",
]

[project.urls]
Homepage      = "https://github.com/ganeshbabunn/pyCoreGage"
Repository    = "https://github.com/ganeshbabunn/pyCoreGage"
"Bug Tracker" = "https://github.com/ganeshbabunn/pyCoreGage/issues"
Documentation = "https://github.com/ganeshbabunn/pyCoreGage#readme"

[project.scripts]
pycoregage = "pyCoreGage._cli:main"

[tool.setuptools.packages.find]
where = ["."]
include = ["pyCoreGage*"]

[tool.setuptools.package-data]
pyCoreGage = [
    "data/*.xlsx",
    "templates/*.py",
]

[tool.pytest.ini_options]
testpaths    = ["tests"]
addopts      = "-v --tb=short"
log_cli      = true
log_cli_level = "WARNING"

[tool.coverage.run]
source = ["pyCoreGage"]
omit   = ["tests/*", "examples/*"]

[tool.coverage.report]
show_missing = true

[tool.uv.workspace]
members = [
    "examples/STUDY01_TRAIL01",
]