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#!/usr/bin/env python
from setuptools import setup, find_packages
long_description = """
Compyrtment is a simple Python library to work with compartment models. It's
a simple tool to aid with fast prototyping with models such as the SIR, SIS
and SEIR epidemic models or the Lotka-Volterra model of predation. It supports:
- Designing models with arbitrary states and constant, linear and quadratic
couplings between them;
- Numerical integration of the ODE system of a model;
- Numerical integration of 'sensitivity curves' - the gradient of each curve
with respect to parameters as well as initial conditions;
- Fitting a model's parameters to existing data;
- Stochastic simulation using Gillespie's algorithm
"""
setup(name='Compyrtment',
version='0.5.7',
description='A simple Python library for compartment models',
long_description=long_description,
url='https://github.com/stur86/compyrtment',
author='Simone Sturniolo',
author_email='simonesturniolo@gmail.com',
keywords=['differential equations', 'compartment models', 'epidemiology',
'ecology', 'reactions', 'gillespie'],
classifiers=[
# How mature is this project? Common values are
# 3 - Alpha
# 4 - Beta
# 5 - Production/Stable
'Development Status :: 4 - Beta',
# Intended audience
'Intended Audience :: Education',
'Intended Audience :: Science/Research',
# Topics
'Topic :: Scientific/Engineering',
'Topic :: Scientific/Engineering :: Artificial Life',
'Topic :: Scientific/Engineering :: Chemistry',
# License
'License :: OSI Approved :: MIT License',
# Specify the Python versions you support here. In particular,
# ensure that you indicate whether you support Python 2, Python 3
# or both.
'Programming Language :: Python :: 3',
],
license='MIT',
packages=find_packages(),
install_requires=[
'numpy',
'scipy',
'numba'
],
python_requires='>=3.6.*'
)