Repositories list

• dnasight

  Public
  Python

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 18, 2026May 18, 2026

• dnasightsmodels

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated Jan 29, 2026Jan 29, 2026

• 2photodiffusion

  Public
  Python

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jan 13, 2026Jan 13, 2026

• splender

  Public
  Fit splines to images and videos through differentiable rendering

  Python

  •11 fork•77 stars•00 issues•00 pull requests•Updated Jun 13, 2025Jun 13, 2025

• recloc

  Public
  [PRL 2025] Official code for Local Clustering and Global Spreading of Receptors for Optimal Spatial Gradient Sensing

  information-theorydecision-makingautomatic-differentiation+ 4

  information-theorydecision-makingautomatic-differentiationbiophysicsjaxgradient-sensingcellular-signaling

  Python

  •00 forks•22 stars•00 issues•00 pull requests•Updated Apr 17, 2025Apr 17, 2025

• diffusionsplit

  Public
  Python

  •

  MIT License

  •00 forks•11 star•00 issues•00 pull requests•Updated Dec 6, 2024Dec 6, 2024

• cellpose-overlap

  Public
  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Dec 6, 2024Dec 6, 2024

• gradnodes

  Public
  Official code implementation of the paper on adaptive node position in biological transport networks

  biological-simulationsjaxtransport-networks+ 1

  biological-simulationsjaxtransport-networksdifferentiable-physics

  Python

  •

  MIT License

  •11 fork•55 stars•00 issues•00 pull requests•Updated Nov 1, 2024Nov 1, 2024

• full-scale-leaves

  Public
  Python

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Oct 29, 2024Oct 29, 2024

• deeptangle

  Public
  [Comms Bio 2023] Official Code for Fast Detection of Slender Bodies in High Density Microoscopy Data

  computer-visiondeep-learningsplines+ 4

  computer-visiondeep-learningsplinesc-eleganslatent-spacequantitative-biologysingle-stage-detector

  Python

  •

  MIT License

  •22 forks•4141 stars•00 issues•00 pull requests•Updated Aug 30, 2024Aug 30, 2024

• chemoxrl

  Public
  [PNAS Nexus 2024] Learning Optimal Integration of Spatial and Temporal Information.

  reinforcement-learningrecurrent-neural-networkschemotaxis+ 1

  reinforcement-learningrecurrent-neural-networkschemotaxisjax

  Python

  •

  MIT License

  •00 forks•55 stars•00 issues•00 pull requests•Updated Oct 18, 2023Oct 18, 2023

• deeptanglelabel

  Public
  HTML

  •

  MIT License

  •00 forks•22 stars•00 issues•00 pull requests•Updated Feb 6, 2023Feb 6, 2023