Official implementation of "CellFlux: Simulating Cellular Morphology Changes via Flow Matching" (ICML 2025)
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Sep 3, 2025 - Python
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cell-imaging
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Anomaly detection for high-content image-based phenotypic cell profiling
visualization machine-learning deep-learning drug-discovery profiling representation-learning anomaly-detection cell-painting cell-imaging
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Feb 7, 2025 - Jupyter Notebook
Python and Matlab code for generating the high-density multi-color spectroscopic single-molecule localization microscopy (sSMLM) super-resolution images from the low density ones (upto 8-fold fewer frames) .
deep-neural-networks acceleration ai computer-vision deep-learning computational convolutional-neural-networks super-resolution spectroscopy biomedical multicolor mitochondria dyes single-molecule-localization cell-imaging tubulin peroxisome
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Jun 13, 2026 - Python
Código de python para software de conteo de células neuronales
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Jan 28, 2024 - Python
FUSE toolkit supports fluorescent cell image alignment and analysis.
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Mar 5, 2024 - HTML
HPC-Organoid-Quant is a modular image analysis pipeline for quantifying organoids in brightfield microscopy images, with optional GFP analysis. It handles fragmented structures, extracts key features, and outputs visual overlays and CSV reports. Runs in Google Colab or locally via Conda or Python venv.
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Jul 18, 2025 - Jupyter Notebook
Physics-Informed Ellipsoidal Coordinate Encoding Implicit Neural Representation for high-resolution volumetric wide-field microscopy
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Feb 1, 2026 - Python
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