Segmentation of nuclear signals in fluorescently stained mouse brain tissue sections. Segmentations performed with a fine-tuned Stardist 3D model and/or Cellpose
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Updated
Jun 8, 2026 - Jupyter Notebook
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cell-population-analysis
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This toolkit provides Python code for preprocessing, quality control, clustering, and visualization of single-cell RNA sequencing data using Scanpy. Ideal for deep insights into cell populations and gene expression.
visualization quality-control clustering data-preprocessing python-data-analysis scanpy gene-expression-analysis single-cell-rna-sequencing cell-population-analysis
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Updated
Sep 9, 2024
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